ms609/inapplicable: Inapplicable data in parsimony analysis

Correctly calculates tree parsimony scores when datasets contain inapplicable data. Also provides tree rearrangement and tree search functions that preserve a tree's outgroup. The algorithm employed herein is described in BRAZEAU, M. D., GUILLERME, T. and SMITH, M. R. (2017). Morphological phylogenetic analysis with inapplicable data. BioRxiv. <doi:10.1101/209775> This R package is deposited at FigShare <doi:10.6084/m9.figshare.c.3911821> For an introduction to using the package, please see the manual heading 'inapplicable-package'.

Getting started

Package details

MaintainerMartin R. Smith <[email protected]>
LicenseGPL (>= 3)
Version0.2.3.9002
URL https://github.com/ms609/inapplicable
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("ms609/inapplicable")
ms609/inapplicable documentation built on Jan. 25, 2018, 6:53 p.m.