nu_correct: Use Freesurfers Non-Uniformity Correction

In muschellij2/freesurfer: Wrapper Functions for 'Freesurfer'

Use Freesurfers Non-Uniformity Correction

Description

This function calls nu_correct to correct for non-uniformity

Usage

nu_correct(file, mask = NULL, opts = "", verbose = TRUE, ...)

Arguments

file	(character) input filename
mask	(character or nifti) Mask to use for correction.
opts	(character) additional options to mri_segment
verbose	print diagnostic messages
...	additional arguments passed to fs_cmd.

Value

Object of class nifti depending on retimg

Examples

## Not run: 
if (have_fs()){
    nu_correct("/path/to/T1.nii.gz")
} 

## End(Not run) 

muschellij2/freesurfer documentation built on Nov. 28, 2023, 4:45 a.m.