mrmath: Compute summary statistic on image intensities either across...

In muschellij2/mrtrix: Port of MRTrix software

Description

Compute summary statistic on image intensities either across images, or along a specified axis of a single image

Usage

mrmath(infile, operation = c("mean", "median", "sum", "product", "rms",
  "norm", "var", "std", "min", "max", "absmax", "magmax"),
  datatype = c("float32", "float32le", "float32be", "float64",
  "float64le", "float64be", "int64", "uint64", "int64le", "uint64le",
  "int64be", "uint64be", "int32", "uint32", "int32le", "uint32le",
  "int32be", "uint32be", "int16", "uint16", "int16le", "uint16le",
  "int16be", "uint16be", "cfloat32", "cfloat32le", "cfloat32be",
  "cfloat64", "cfloat64le", "cfloat64be", "int8", "uint8", "bit"),
  outfile = NULL, axis = NULL, opts = "", verbose = TRUE, ...)

Arguments

infile	input filename or filenames. Can be list of nifti objects too.
operation	Supported operations are: mean, median, sum, product, rms (root-mean-square value), norm (vector 2-norm), var (unbiased variance), std (unbiased standard deviation), min, max, absmax (maximum absolute value), magmax (value with maximum absolute value, preserving its sign).
datatype	specify output image data type
outfile	Output response file
axis	perform operation along a specified axis of a single input image
opts	Additional options to pass
verbose	Print diagnostic output
...	arguments to pass to std_opts

Value

Output filename

Examples

## Not run: 
infile = "~/Downloads/data.nii.gz"

## End(Not run)

muschellij2/mrtrix documentation built on July 9, 2019, 9:15 a.m.