reg_to_t1: Register Images to Another image (usually T1)

In muschellij2/smri.process: Processing of Structural Magnetic Resonance Imaging

Description

Register Images to Another image (usually T1)

Usage

reg_to_t1(x, gs_space = NULL, interpolator = "Linear",
  gs_interpolator = "NearestNeighbor", outdir = tempdir(),
  verbose = TRUE, reg_space = "T1", suffix = "_regtoT1",
  remove_negative = TRUE, zero_origin = FALSE)

Arguments

x	List of images or character vector. Must be named with the imaging modalities. The reg_space file must be included
gs_space	space the Gold Standard is located (if applicable)
interpolator	interpolation done in registration
gs_interpolator	interpolation done in registration for gold standard
outdir	Output directory
verbose	print diagnostic messages
reg_space	space to register images to
suffix	Name to append to the image filename
remove_negative	After registration, any values < 0 are set to 0
zero_origin	Should the origin be set to 0 for the image to be registered to?

Value

List of Images

muschellij2/smri.process documentation built on Nov. 22, 2019, 11:12 a.m.