reg_to_t1: Register Images to Another image (usually T1)

Description Usage Arguments Value

View source: R/reg_to_t1.R

Description

Register Images to Another image (usually T1)

Usage

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reg_to_t1(x, gs_space = NULL, interpolator = "Linear",
  gs_interpolator = "NearestNeighbor", outdir = tempdir(),
  verbose = TRUE, reg_space = "T1", suffix = "_regtoT1",
  remove_negative = TRUE, zero_origin = FALSE)

Arguments

x

List of images or character vector. Must be named with the imaging modalities. The reg_space file must be included

gs_space

space the Gold Standard is located (if applicable)

interpolator

interpolation done in registration

gs_interpolator

interpolation done in registration for gold standard

outdir

Output directory

verbose

print diagnostic messages

reg_space

space to register images to

suffix

Name to append to the image filename

remove_negative

After registration, any values < 0 are set to 0

zero_origin

Should the origin be set to 0 for the image to be registered to?

Value

List of Images


muschellij2/smri.process documentation built on Oct. 4, 2018, 11:01 a.m.