README.md

In musikutiv/tsTools: Toolbox for Functional Genomics Data Processing in R

Requirements

Bioconductor packages HilbertVis, IRanges, GenomicRanges

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install(c("HilbertVis", "IRanges", "GenomicRanges"))

Pandoc for building vignettes

remotes::install_github("cderv/pandoc")
library(pandoc)
# Install version
pandoc_install("2.7.3")

Installation

install.packages("devtools")

library(devtools)
# if pandoc is present
install_github("musikutiv/tsTools", build_vignettes=T)
# otherwise
install_github("musikutiv/tsTools", build_vignettes=F)

To view the documentation (only if pandoc is installed)

library(tsTools)
browseVignettes("tsTools”)

musikutiv/tsTools documentation built on July 25, 2024, 2:42 a.m.