Description Usage Arguments Details Value See Also Examples
This function reads in gene ontology annotations from a GAF file
1 | read.gaf(filename='http://geneontology.org/gene-associations/gene_association.mgi.gz')
|
filename |
The name of input file. Should be a (tab-separated text) gene ontology file of GAF format, with one row per GO item per gene. |
By default, the argument filename
links to the mouse gene ontology data file at geneontology.org. More annotation files can be found from http://geneontology.org/page/download-annotations.
A data.frame with three components:
ID |
Accession ID |
Symbol |
Gene Symbol |
GO.ID |
GO Term ID |
1 2 3 4 | ## Not run:
x = read.gaf()
## End(Not run)
|
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