read.obo: Read .obo File
In mw201608/msigdb: MSigDB Gene Set Collections
Description
Usage
Arguments
Details
Value
See Also
Examples
Description
This function reads in gene ontology annotations from a .obo file
Usage
1
read.obo(filename='http://purl.obolibrary.org/obo/go.obo')
Arguments
filename
The name of a gene ontology data file in OBO format.
Details
By default, the argument filename links to the obo file at geneontology.org.
Value
A data.frame with three components:
GO.ID
GO Term ID
System
Ontology System
Term
GO Term
See Also
Examples
1
2
3
4
## Not run:
x = read.obo()
## End(Not run)
mw201608/msigdb documentation built on Aug. 13, 2021, 10:42 p.m.
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Description Usage Arguments Details Value See Also Examples
Description
This function reads in gene ontology annotations from a .obo file
Usage
1 | read.obo(filename='http://purl.obolibrary.org/obo/go.obo')
|
Arguments
filename |
The name of a gene ontology data file in OBO format. |
Details
By default, the argument filename links to the obo file at geneontology.org.
Value
A data.frame with three components:
GO.ID |
GO Term ID |
System |
Ontology System |
Term |
GO Term |
See Also
Examples
1 2 3 4 | ## Not run:
x = read.obo()
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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