Man pages for ncahill89/BTF
Run the Bayesian Transfer Function
| ConstructMCMCArray | Read in JAGS objects |
| eff_size | Run MCMC diagnostics - effective sample size |
| gr_diag | Run MCMC diagnostics - rhat |
| mcse | Run MCMC diagnostics - monte carlo standard error (mcse) |
| NJ_core_species | Core species counts from New Jersey, USA. |
| NJ_modern_elevation | Modern elevations from New Jersey, USA. |
| NJ_modern_species | Modern species counts from New Jersey, USA. |
| NJ_priors | Prior elevation ranges for core assemblages |
| pipe | Pipe operator |
| response_curves | Create Species Response Curves |
| run_core | Run the core model |
| run_modern | Run the modern (calibration) model |
| run_valid | Carry out a validation |
| sort_core | Sort core dataset to be compatible with the sorted modern... |
| sort_modern | Sort modern species dataset based on total count size |
| swli_results | Get SWLI estimates and uncertainty |
