run_modern: Run the modern (calibration) model

In ncahill89/BTF:

Description

Run the modern (calibration) model

Usage

run_modern(
  modern_elevation = NULL,
  modern_species = NULL,
  dx = 0.2,
  ChainNums = seq(1, 3),
  n.iter = 40000,
  n.burnin = 10000,
  n.thin = 15,
  validation.run = FALSE,
  sigma_z_priors = NULL,
  fold = 1
)

Arguments

dx	The elevation interval for spacing the spline knots. Defaults to 0.2.
ChainNums	The number of MCMC chains to run
n.iter	The number of iterations
n.burnin	The number of burnin samples
n.thin	The number of thinning
modern_elevation.csv	A .csv file location for modern elevations
modern_species.csv	A .csv file location for modern counts (to be sorted with sort_modern)
run.on.server	Set to TRUE if you wish to run the chains in parallel on a server

Value

Nothing is returned, the relevant data will be saved.

Examples

run_modern()

ncahill89/BTF documentation built on March 29, 2021, 12:04 p.m.