ObtainCompositeModels: Obtain the list of pairs in a composite model. Do this by...

In ncats/MultiOmicsGraphPrediction: Network-Based Ensemble Prediction from IntLIM Predictors

Obtain the list of pairs in a composite model. Do this by merging all composite models with overlap. Use the full models so that we consider the original overlap before pruning. This uses only the structure of the graph and requires no dependencies on previous layers.

Description

Obtain the list of pairs in a composite model. Do this by merging all composite models with overlap. Use the full models so that we consider the original overlap before pruning. This uses only the structure of the graph and requires no dependencies on previous layers.

Usage

ObtainCompositeModels(components, pairsInEachPredictor, importantModels)

Arguments

components	A Model object containing the list of components in the graph.
pairsInEachPredictor	A list of pairs contained within each predictor.
importantModels	A list of all pairs that were found to be important in the previous layer.

Value

A list with the following elements: A list of sets comprising the trimmed models, a list of sets comprising the untrimmed models, and a mapping from the predictors in the previous stage to the current stage.

ncats/MultiOmicsGraphPrediction documentation built on Aug. 23, 2023, 9:19 a.m.