tss_predictor: Train TSS activity predictor

Description Usage Arguments Value

View source: R/tss_predictor.R

Description

A function that trains and returns model to predict TSS activity using the same convolutional architecture as the pre-trained predictor that ships with this package. Just here in case a user wants to try training the model on alternative data/labels.

Usage

1
tss_predictor(train_features, train_labels, train = TRUE)

Arguments

train_features

a 3-dimensional numeric array where the dimensions are [transcript, bin, strand]. (IMPORTANT: bin must be >= 25)

train_labels

a 0/1 encoded vector of labels with 1 per transcript

train

logical. Whether to train model

Value

a trained keras model


ndukler/tuSelecter2 documentation built on Aug. 4, 2020, 1 p.m.