Description Usage Arguments Value
Performs (semi)Parametric Bootstrap Joint ((s)PBJ) Spatial Extent Inference
1 |
statMap |
statMap object as obtained from computeStats. |
cfts |
Numeric vector of cluster forming thresholds to use. Consistent with other imaging software these thresholds are one tailed (e.g. p<0.01 imples z>2.32). |
nboot |
Number of bootstraps to perform. |
kernel |
Kernel to use for computing connected components. Box is default (26 neighbors), but Diamond may also be reasonable. |
Returns a list of length length(cfts)+4. The first four elements contain statMap$stat, statMap$template, statMap$mask, and statMap$df. The remaining elements are lists containing the following:
pvalues |
A vector of p-values corresponding to the cluster labels in clustermaps. |
clustermap |
A niftiImage object with the cluster labels. |
pmap |
A nifti object with each cluster assigned the negative log10 of its cluster extent FWE adjusted p-value. |
CDF |
A bootstrap CDF. |
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