README.md

In neurodata/fmriutils: fMRI Derivative Utilities

fmriutils

The fmriutils package provides functions for loading, visualizing, and interacting with basic fMRI derivatives.

Installation

The following installation has been tested on Ubuntu 16.04 with R version 3.4.1. Prior to starting, we need to install several packages in a bash terminal session that are required for proper configuration of igraph:

sudo apt-get -y install libcurl4-openssl-dev libssl-dev libxml2-dev

Next, we can install the R package dependencies directly. From an R terminal (or a GUI such as Rstudio), type:

install.packages(c('devtools', 'Rcpp', 'RSpectra', 'stringr', 'ggplot2', 'reshape2', 'abind', 'plyr'))
require(devtools)
install_github('igraph/rigraph')  # installs latest version of igraph
install_github('neurodata/fmriutils')
require('fmriutils')

For tutorials on usage, see our vignettes:

fmriutils

neurodata/fmriutils documentation built on May 14, 2019, 2:30 p.m.