Files in neurodata/r-mgc

Multiscale Graph Correlation

R/MGCDistTransform.R R/MGCKSample.R R/MGCLocalCorr.R R/MGCPermutationTest.R R/MGCSampleStat.R R/discrPermutationTests.R R/discrStat.R R/remove_isolates.R R/simulations.R R/validators.R README.md codecov.R docs/discriminability/old/dcor_simulations.R docs/discriminability/old/figure_1.Rmd docs/discriminability/old/figure_1/fig1.pdf docs/discriminability/old/figure_1/fig1_R.pdf docs/discriminability/old/figure_2.Rmd docs/discriminability/old/figure_2/fig_2.pdf docs/discriminability/old/figure_2/fig_updated.pdf docs/discriminability/old/figure_2/sims_updated.pdf docs/discriminability/old/figure_2/simulations.pdf docs/discriminability/old/figure_3.Rmd docs/discriminability/old/figure_4.Rmd docs/discriminability/old/figure_4/fig4.pdf docs/discriminability/old/figure_4/fig4_R.pdf docs/discriminability/old/figure_5/fig5.pdf docs/discriminability/old/figure_5/fig5_R.pdf docs/discriminability/old/figure_5/multi_modal.pdf docs/discriminability/old/figure_5_fmri.Rmd docs/discriminability/old/figure_6.Rmd docs/discriminability/old/figure_6/dependence_figure.pdf docs/discriminability/old/figure_6/dependence_figure_R.pdf docs/discriminability/old/knn_thresholding.R docs/discriminability/old/ndmg/multi-modal_connectome.Rmd docs/discriminability/old/rf_thresholding.R docs/discriminability/old/rf_wt_driver.R docs/discriminability/old/sims_driver.R docs/discriminability/old/simulations/1d_exploratory.Rmd docs/discriminability/old/simulations/dcor_analysis.Rmd docs/discriminability/old/simulations/null_experiments.Rmd docs/discriminability/old/simulations/null_experiments.pdf docs/discriminability/old/simulations/sim_driver.R docs/discriminability/paper/64pipes_fig/real_data.Rmd docs/discriminability/paper/dcor_fig/Rplot.pdf docs/discriminability/paper/dcor_fig/data_xfms.R docs/discriminability/paper/dcor_fig/dcor_bypipe_exps.Rmd docs/discriminability/paper/dcor_fig/dep_genomics_driver.R docs/discriminability/paper/dcor_fig/dep_wt_driver.R docs/discriminability/paper/dcor_fig/dependence_figure.pdf docs/discriminability/paper/dcor_fig/genomics_driver_chris.R docs/discriminability/paper/discr_computation/real_data_driver.R docs/discriminability/paper/discr_computation/realdat_perm_testing.R docs/discriminability/paper/mase/MASE-classification-example.R docs/discriminability/paper/mase/MASE-hyptest-example.R docs/discriminability/paper/mase/R/getElbows.R docs/discriminability/paper/mase/R/loadAll.R docs/discriminability/paper/mase/R/mase.R docs/discriminability/paper/mase/R/omnibus-embedding.R docs/discriminability/paper/mase/R/parametric-bootstrap.R docs/discriminability/paper/mase/R/sample_graphs.R docs/discriminability/paper/mase/R/simulations.R docs/discriminability/paper/mase/README.md docs/discriminability/paper/multi_modal_opts/discr_table.Rmd docs/discriminability/paper/multi_modal_opts/multi_modal_opts.Rmd docs/discriminability/paper/multi_modal_opts/multi_modal_opts.pdf docs/discriminability/paper/multi_modal_opts/multi_modal_opts_R.pdf docs/discriminability/paper/scratch/fpi_test.R docs/discriminability/paper/simulations/bound_sims.R docs/discriminability/paper/simulations/dummy_sims.R docs/discriminability/paper/simulations/dummy_sims.Rmd docs/discriminability/paper/simulations/import_hyppo.R docs/discriminability/paper/simulations/multisim_figure.Rmd docs/discriminability/paper/simulations/multisim_figure_R.pdf docs/discriminability/paper/simulations/one_sample_sims.R docs/discriminability/paper/simulations/shared_scripts.R docs/discriminability/paper/simulations/sims_driver.R docs/discriminability/paper/simulations/two_sample_sims.R docs/discriminability/paper/slides/slide_deck.Rmd docs/mgc/mgc_sims.Rmd docs/mgc/tests/GenerateSimulations.R docs/mgc/tests/run_1d_sims.R docs/mgc/tests/run_hd_sims.R docs/mgc/tests/test_independence.R docs/mgc/tests/test_twosample.R docs/mgc/tests/testthat.R docs/mgc/tests/testthat/test_discr.R man/ConnCompLabel.Rd man/DistCentering.Rd man/DistRanks.Rd man/LocalCov.Rd man/Smoothing.Rd man/Thresholding.Rd man/discr.mnr.Rd man/discr.rdf.Rd man/discr.sims.cross.Rd man/discr.sims.exp.Rd man/discr.sims.fat_tails.Rd man/discr.sims.linear.Rd man/discr.sims.radial.Rd man/discr.stat.Rd man/discr.test.one_sample.Rd man/discr.test.two_sample.Rd man/discr.validator.Rd man/gen.coefs.Rd man/gen.sample.labels.Rd man/gen.x.unif.Rd man/mgc.dist.validator.Rd man/mgc.dist.xfm.Rd man/mgc.distance.Rd man/mgc.ksample.Rd man/mgc.localcorr.Rd man/mgc.localcorr.driver.Rd man/mgc.sims.2ball.Rd man/mgc.sims.2sphere.Rd man/mgc.sims.cubic.Rd man/mgc.sims.exp.Rd man/mgc.sims.joint.Rd man/mgc.sims.linear.Rd man/mgc.sims.quad.Rd man/mgc.sims.random_rotate.Rd man/mgc.sims.rotation.Rd man/mgc.sims.sim_gmm.Rd man/mgc.sims.spiral.Rd man/mgc.sims.step.Rd man/mgc.sims.ubern.Rd man/mgc.sims.wshape.Rd man/mgc.stat.Rd man/mgc.stat.driver.Rd man/mgc.test.Rd man/mgc.validator.Rd man/remove.isolates.Rd tests/testthat.R tests/testthat/test-discr.R tests/testthat/test-distance.R tests/testthat/test-isolates.R tests/testthat/test-mgc.R vignettes/Discriminability.Rmd vignettes/MGC.Rmd vignettes/class_simulations.Rmd vignettes/dep_simulations.Rmd