agg_results: Aggregate results
In neurogenomics/MultiEWCE: Multi-Scale Target Explorer
agg_results R Documentation
Aggregate results
Description
Aggregate enrichment results from generated by gen_results.
Counts unique entries in count_var while grouping by group_var.
Usage
agg_results(
phenos,
count_var = "hpo_name",
group_var = "CellType",
sep = "; ",
verbose = TRUE
)
Arguments
phenos
A data.table containing HPO IDs and other metadata.
count_var
Variable to get counts for per group_var.
group_var
Variable to group counts by.
sep
Separator for collapsed character columns.
verbose
Print messages.
Value
Aggregated data.table
Examples
phenos <- subset_results(filters = list(CellType="Microglia"))
agg_res <- agg_results(phenos = phenos)
neurogenomics/MultiEWCE documentation built on Sept. 28, 2024, 2:27 a.m.
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| agg_results | R Documentation |
Aggregate results
Description
Aggregate enrichment results from generated by gen_results.
Counts unique entries in count_var while grouping by group_var.
Usage
agg_results(
phenos,
count_var = "hpo_name",
group_var = "CellType",
sep = "; ",
verbose = TRUE
)
Arguments
phenos |
A data.table containing HPO IDs and other metadata. |
count_var |
Variable to get counts for per |
group_var |
Variable to group counts by. |
sep |
Separator for collapsed character columns. |
verbose |
Print messages. |
Value
Aggregated data.table
Examples
phenos <- subset_results(filters = list(CellType="Microglia"))
agg_res <- agg_results(phenos = phenos)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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