sis_csmc: controlled SMC sampler for SIS model with population-level...
In nianqiaoju/agents: Toolkit for inference in agent-based modelss

controlled SMC sampler for SIS model with population-level observations

1	sis_csmc(y, model_config, particle_config)

A list containing

'log_final_likelihood' : log marginal likelihood estimator;
'xT': sample from xT given y(0:T);
'particles': [N, (T+1), num_particles] array storing the particles, if particle_config$save_particles = TRUE';
'eves' : the unique ancesters of each particle in the genealogy structure, if save_genealogy = TRUE;
'ess' : effective sample size at each step
'runtime' : elapse time at each step, if clock = TRUE;
'totaltime' : elapse time of running the whole particle filter, if clock = TRUE;