fisherTestGO: Performs Fisher's exact test for enrichment of GO annotation...
In nicohuttmann/htmnanalysis: Analysis of Omics Data
Description
Performs Fisher's exact test for enrichment of GO annotation in given set of genes
Usage
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fisherTestGO(
annotation,
sig.genes,
gene.universe,
gene.list,
inverse = F,
GOdata,
silent = T
)
Arguments
annotation
GO ID
sig.genes
genes in group of interest
gene.universe
all genes
gene.list
optional list of proteins to be enriched instead of an ontology
inverse
inverse enrichment
GOdata
GOdata object
silent
print table
nicohuttmann/htmnanalysis documentation built on Dec. 6, 2020, 3:02 a.m.
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Description
Performs Fisher's exact test for enrichment of GO annotation in given set of genes
Usage
1 2 3 4 5 6 7 8 9 | fisherTestGO(
annotation,
sig.genes,
gene.universe,
gene.list,
inverse = F,
GOdata,
silent = T
)
|
Arguments
annotation |
GO ID |
sig.genes |
genes in group of interest |
gene.universe |
all genes |
gene.list |
optional list of proteins to be enriched instead of an ontology |
inverse |
inverse enrichment |
GOdata |
GOdata object |
silent |
print table |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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