Files in niloyb/CoupledHalfT
What the package does (short line)
.Rbuildignore
.gitignore
CoupledHalfT.Rproj
DESCRIPTION
NAMESPACE
R/RcppExports.R
R/coupledHalfT-package.R
R/coupled_mcmc_half_t.R
R/eta_half_t_sampling.R
R/maxcouplings.R
R/mcmc_half_t.R
R/riboflavin_dataset.R
R/unbiased_mcmc.R
README.Rmd
README.html
README.md
README_files/figure-html/LlagTVplot-1.png
README_files/figure-html/coupled_chain_plot-1.png
README_files/figure-html/coupled_chain_plot-2.png
README_files/figure-html/coupled_chain_plot-3.png
README_files/figure-html/coupled_chain_plot-4.png
README_files/figure-html/coupled_chain_plot-5.png
README_files/figure-html/coupled_chain_plot-6.png
README_files/figure-html/single_chain_plot-1.png
Read-and-delete-me
data/riboflavin.RData
inst/README.md
inst/beta_marginal_density/marginal_beta_posterior_plots.R
inst/gwas/clean_gwas.R
inst/gwas/gwas_data_example1_slurm.R
inst/gwas/gwas_maize_tv_bound_plots.R
inst/gwas/gwas_riboflavin.RData
inst/gwas/gwas_riboflavin_tv_bounds.R
inst/gwas/gwas_riboflavin_unbiased_estimates.R
inst/gwas/gwas_slurm_script1.sh
inst/half_t_degree_of_freedom/degree_of_freedom_Llag.R
inst/half_t_degree_of_freedom/degree_of_freedom_crn_distance_by_p.R
inst/half_t_degree_of_freedom/degree_of_freedom_meet_times.R
inst/half_t_degree_of_freedom/degree_of_freedom_meeting_times.RData
inst/half_t_degree_of_freedom/degree_of_freedom_meeting_times_new.RData
inst/half_t_degree_of_freedom/degree_of_freedom_stat_performance.R
inst/half_t_degree_of_freedom/stat_perform_componentwise_df.RData
inst/half_t_degree_of_freedom/stat_performance_t_dist_prior.RData
inst/nrepeats_eta/nrepeats_eta_plot.R
inst/one_scale_coupling/one_scale_coupling_meeting_times.R
inst/one_scale_coupling/one_scale_coupling_meetings.RData
inst/one_scale_coupling/one_scale_coupling_plots.R
inst/stein_discrepancy/generate_half_t_posterior_data.R
inst/stein_discrepancy/std_normal_simulations.ipynb
inst/stein_discrepancy/stein_half_t_posterior.ipynb
inst/stein_discrepancy/stein_half_t_prior.ipynb
inst/stein_discrepancy/stein_plots.R
inst/stein_discrepancy/stein_rwmh_mcmc.ipynb
inst/switch_to_crn_coupling/switch_to_crn__two_scale_coupling_plot.RData
inst/switch_to_crn_coupling/switch_to_crn_coupling_comparison_plots.R
inst/truncated_prior_xi/truncated_prior_xi_plots.R
inst/truncated_prior_xi/truncated_prior_xi_simulations.R
inst/two_scale_coupling/d_threshold_crn_distance_by_p.R
inst/two_scale_coupling/d_threshold_meeting_times_p500.R
inst/two_scale_coupling/d_threshold_trajectory_plots.R
inst/two_scale_coupling/metric_comparison_plot.R
inst/two_scale_coupling/one_scale_two_scale_coupling_comparison_plots.R
inst/two_scale_coupling/two_scale_coupling_meeting_times.R
inst/two_scale_coupling/two_scale_coupling_plot.RData
man/M_matrix.Rd
man/X_eta_tX.Rd
man/beta_unbiased_histogram.Rd
man/beta_update.Rd
man/conf_hyp.Rd
man/coupledHalfT-package.Rd
man/coupled_half_t_kernel.Rd
man/coupled_half_t_mcmc.Rd
man/crn_max_sigma2_coupling.Rd
man/crn_max_xi_coupling.Rd
man/d_trunc_poly_exp.Rd
man/eta_update_half_t.Rd
man/eta_update_half_t_crn_couple.Rd
man/eta_update_half_t_max_couple_till_you_miss.Rd
man/get_max_coupling.Rd
man/half_t_kernel.Rd
man/half_t_mcmc.Rd
man/log_ratio.Rd
man/log_ratio_approx.Rd
man/low_inc_conf_hyp.Rd
man/low_inc_gamma.Rd
man/low_inc_gamma_inv.Rd
man/meetingtime_half_t.Rd
man/plot_histogram.Rd
man/r_trunc_poly_exp_crn.Rd
man/rcppeigen_hello_world.Rd
man/riboflavin.Rd
man/sample_unbiasedestimator.Rd
man/sigma2_update.Rd
man/xi_update.Rd
src/.gitignore
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/rcppeigen_functions.cpp
src/rcppeigen_hello_world.cpp
