CreateSpliceJunctionTable: Create a table of unique splice junction expression per tab...
In njmadrid/RNAseqQuality: Provides a set of functions for summarizing the quality of RNA-seq data.
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Create a table of unique splice junction expression per tab file (*.out.tab) generated using during
some alignment processes (e.g. using the STAR aligner).
Usage
1
CreateSpliceJunctionTable(tabfiles)
Arguments
tabfiles
directory path of *.out.tab files generated during alignment.
Value
A data.frame of the unique splice junction expression per tab file (*.out.tab).
Author(s)
Nathaniel J. Madrid, Jason Byars
Examples
1
2
tabfiles <- dir(path="tabs/", pattern=".*.out.tab$", full.names=T)
JunctionTables <- CreateSpliceJunctionTable(tabfiles)
njmadrid/RNAseqQuality documentation built on May 20, 2019, 3:32 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
Create a table of unique splice junction expression per tab file (*.out.tab) generated using during some alignment processes (e.g. using the STAR aligner).
Usage
1 | CreateSpliceJunctionTable(tabfiles)
|
Arguments
tabfiles |
directory path of *.out.tab files generated during alignment. |
Value
A data.frame of the unique splice junction expression per tab file (*.out.tab).
Author(s)
Nathaniel J. Madrid, Jason Byars
Examples
1 2 | tabfiles <- dir(path="tabs/", pattern=".*.out.tab$", full.names=T)
JunctionTables <- CreateSpliceJunctionTable(tabfiles)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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