log_add_min: Log add minimum value
In nkurniansyah/Olivia: RNA-seq Analysis
View source: R/log_transform.R
log_add_min R Documentation
Log add minimum value
Description
Type of log transform, replacing zero with minimum values for each genes
Usage
log_add_min(count_matrix)
Arguments
count_matrix
A matrix of gene counts (possibly transformed). rows are genes, columns are individuals
Value
A matrix of gene expression counts after transformation
Examples
data(rnaseq_count_matrix)
rnaseq_count_matrix<- rnaseq_count_matrix[rowSums(rnaseq_count_matrix)>0,]
log_add_min(count_matrix=rnaseq_count_matrix)
nkurniansyah/Olivia documentation built on July 29, 2023, 9:10 a.m.
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View source: R/log_transform.R
| log_add_min | R Documentation |
Log add minimum value
Description
Type of log transform, replacing zero with minimum values for each genes
Usage
log_add_min(count_matrix)
Arguments
count_matrix |
A matrix of gene counts (possibly transformed). rows are genes, columns are individuals |
Value
A matrix of gene expression counts after transformation
Examples
data(rnaseq_count_matrix)
rnaseq_count_matrix<- rnaseq_count_matrix[rowSums(rnaseq_count_matrix)>0,]
log_add_min(count_matrix=rnaseq_count_matrix)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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