median_normalization: Median Normalization
In nkurniansyah/Olivia: RNA-seq Analysis
View source: R/normalization.R
median_normalization R Documentation
Median Normalization
Description
Median normalization is using median value for each library so they have equal size
Usage
median_normalization(count_matrix)
Arguments
count_matrix
A matrix of gene counts (possibly transformed). rows are genes, columns are individuals
Value
median_norm A matrix of gene counts after normalization
Examples
data(rnaseq_count_matrix)
rnaseq_count_matrix<- rnaseq_count_matrix[rowSums(rnaseq_count_matrix)>0,]
median_normalization(rnaseq_count_matrix)
nkurniansyah/Olivia documentation built on July 29, 2023, 9:10 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/normalization.R
| median_normalization | R Documentation |
Median Normalization
Description
Median normalization is using median value for each library so they have equal size
Usage
median_normalization(count_matrix)
Arguments
count_matrix |
A matrix of gene counts (possibly transformed). rows are genes, columns are individuals |
Value
median_norm A matrix of gene counts after normalization
Examples
data(rnaseq_count_matrix)
rnaseq_count_matrix<- rnaseq_count_matrix[rowSums(rnaseq_count_matrix)>0,]
median_normalization(rnaseq_count_matrix)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.