# You need these libraries to run this template:
library(tidyverse)
library(DT)





Welcome in the PCTG R Markdown template. This document describes how the template looks like, building an interactive Manhattan plot.

Loading data


Let's load a GWAS summary statistic stored in the qqman library. This library is:


Show data in a table


It's often handy to keep a trace of the raw data somewhere in your document. The DT library allows to build interactive tables that you can search, filter, highlight and more.


Manhattan plot


Using HTML outputs you can embed some interactive graphics. For example, the plotly library can transform any of your ggplot2 graphic in an interactive chart:

# Libraries


nmcdev/nmcMetResources documentation built on Feb. 29, 2020, 10:33 a.m.