discard_groundfish: discard_groundfish: Calculate groundfish discards

In noaa-garfo/discaRd: Cochran bycatch estimation

discard_groundfish: Calculate groundfish discards

Description

discard_groundfish: Calculate groundfish discards

Usage

discard_groundfish(
  con,
  species = species,
  FY = fy,
  gf_dat = gf_dat,
  non_gf_dat = non_gf_dat,
  gf_trips_only = F,
  save_dir = file.path(getOption("maps.discardsPath"), "groundfish"),
  run_parallel = FALSE
)

Arguments

con	ROracle connection to Oracle (e.g. MAPS)
species	dataframe with species info
FY	Fishing Year
gf_dat	Data frame of groundfish trips built from CAMS_OBS_CATCH and control script routine
non_gf_dat	Data frame of non-groundfish trips built from CAMS_OBS_CATCH and control script routine
gf_trips_only	Flag if user only wants to run groundfish trips (e.g. for quota monitoring)
save_dir	Directory to save (and load saved) results
run_parallel	option to run species discard calculations in parallel

Value

nothing currently, writes out to fst files (add oracle?)

Author(s)

Benjamin Galuardi

noaa-garfo/discaRd documentation built on April 17, 2025, 10:32 p.m.