run_discard: Run discaRd end to end

In noaa-garfo/discaRd: Cochran bycatch estimation

Run discaRd end to end

Description

Run discaRd end to end

Usage

run_discard(
  bdat,
  ddat_focal,
  c_o_tab = c_o_dat2,
  species_itis = "164712",
  stratvars = c("GEARTYPE", "meshgroup", "region", "halfofyear"),
  aidx = c(1, 2)
)

Arguments

bdat	table of observed trips that can include (and should include) multiple years
ddat_focal	table of observed trips for discard year
c_o_tab	matched table of observed and commerical trips
species_itis	species of interest using SPECIES_ITIS code
stratvars	stratification variables desired
aidx	subset of 'stratvars' for a simplified stratification.
year	year where discard is needed

Value

a list of: 1) Species, 2) discaRd results (summary table, CV, etc), 3)Complete table of commercial trips and discard amounts

noaa-garfo/discaRd documentation built on April 17, 2025, 10:32 p.m.