ensembl_to_id: Convert a given list of ensemble transcript id's into...
In nodrogluap/gumshoe: Supplemental Statistical Tests and Utilities for Kallisto/Sleuth RNASeq Analysis
View source: R/sleuth_pre_processing.R
ensembl_to_id R Documentation
Convert a given list of ensemble transcript id's into ensembl_transcript_id's, external_gene_name's, ensembl_gene_id's, and the original transcript.id
Description
Convert a given list of ensemble transcript id's into ensembl_transcript_id's, external_gene_name's, ensembl_gene_id's, and the original transcript.id
Usage
ensembl_to_id(sig_results, entire_gene_name = TRUE)
Arguments
sig_results
A data frame or list containing ensemble transcript id's
entire_gene_name
Set to FALSE if the non-abbreviated gene name is required. Default value is TRUE.
Value
Converts the original data frame or list into a data frame with columns corresponding to external_gene_name's, description's, and the original ensembl_transcript_id_version.
Examples
# Convert a data frame of ensemble transcript id's
ensemble_to_id(wald_sig_results)
nodrogluap/gumshoe documentation built on Feb. 28, 2023, 6:15 p.m.
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View source: R/sleuth_pre_processing.R
| ensembl_to_id | R Documentation |
Convert a given list of ensemble transcript id's into ensembl_transcript_id's, external_gene_name's, ensembl_gene_id's, and the original transcript.id
Description
Convert a given list of ensemble transcript id's into ensembl_transcript_id's, external_gene_name's, ensembl_gene_id's, and the original transcript.id
Usage
ensembl_to_id(sig_results, entire_gene_name = TRUE)
Arguments
sig_results |
A data frame or list containing ensemble transcript id's |
entire_gene_name |
Set to FALSE if the non-abbreviated gene name is required. Default value is TRUE. |
Value
Converts the original data frame or list into a data frame with columns corresponding to external_gene_name's, description's, and the original ensembl_transcript_id_version.
Examples
# Convert a data frame of ensemble transcript id's ensemble_to_id(wald_sig_results)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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