Man pages for noemiandor/expands
Expanding Ploidy and Allele-Frequency on Nested Subpopulations

assignMutationsMutation Assignment
assignQuantityToMutationQuantity assignment (copy number) to mutations
assignQuantityToSPQuantity assignment (ploidy) to subpopulations
buildMultiSamplePhyloRelations between inter- and intra-sample subpopulations
buildPhyloRelations between subpopulations
cbsMatrix of copy number fragments
cellfrequency_pdfComputes the probability distribution of cellular frequencies...
clusterCellFrequenciesClustering of cellular frequency probability distributions
computeCellFrequencyDistributionsGathering of cell frequency probability distributions
plotSPsSubpopulation Visualization
roiRegions of interest
runExPANdSMain Function
simulationSimulated heterogeneous samples
snvSingle Nucleotide Variations
noemiandor/expands documentation built on May 23, 2017, 4:45 p.m.