cbs: Matrix of copy number fragments
In noemiandor/expands: Expanding Ploidy and Allele-Frequency on Nested Subpopulations
Description
Usage
Format
Source
Description
Copy number segments as obtained by circular binary segmentation. Data is derived from a Glioblastoma tumor (TCGA-06-0152-01).
Usage
1
Format
Numeric matrix with 120 rows (one per copy-number segment) and 4 columns:
chr - the chromosome
startpos - genomic position at which copy-number segment starts.
endpos - genomic position at which copy-number segment ends.
CN_Estimate - average copy-number of the segment among all cells.
Source
Data derived from The Cancer Genome Atlas (TCGA).
noemiandor/expands documentation built on Sept. 13, 2021, 6:25 p.m.
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Description Usage Format Source
Description
Copy number segments as obtained by circular binary segmentation. Data is derived from a Glioblastoma tumor (TCGA-06-0152-01).
Usage
1 |
Format
Numeric matrix with 120 rows (one per copy-number segment) and 4 columns:
chr - the chromosome
startpos - genomic position at which copy-number segment starts.
endpos - genomic position at which copy-number segment ends.
CN_Estimate - average copy-number of the segment among all cells.
Source
Data derived from The Cancer Genome Atlas (TCGA).
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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