API for nolanlab/spade
SPADE -- An analysis and visualization tool for Flow Cytometry
| Global functions | |
|---|---|
| SPADE.FCSToTree | Man page Source code |
| SPADE.addClusterToFCS | Man page Source code |
| SPADE.addDensityToFCS | Man page Source code |
| SPADE.annotateGraph | Man page Source code |
| SPADE.annotateMarkers | Man page Source code |
| SPADE.assignToCluster | Source code |
| SPADE.build.flowFrame | Source code |
| SPADE.cluster | Source code |
| SPADE.clustersToMST | Source code |
| SPADE.createMergeOrderByCellProbability | Source code |
| SPADE.createPopulationMapping | Source code |
| SPADE.density | Source code |
| SPADE.downsampleFCS | Man page Source code |
| SPADE.driver | Man page Source code |
| SPADE.evaluateCellTypeRule | Source code |
| SPADE.flattenAnnotations | Man page Source code |
| SPADE.installPlugin | Man page |
| SPADE.layout.arch | Man page Source code |
| SPADE.markerMedians | Man page Source code |
| SPADE.normalize.out_dir | Source code |
| SPADE.plot.trees | Man page Source code |
| SPADE.read.FCS | Man page Source code |
| SPADE.removeExistingDensityAndClusterColumns | Source code |
| SPADE.strip.sep | Source code |
| SPADE.transform.FCS | Source code |
| SPADE.transform.matrix | Source code |
| SPADE.write.graph | Man page Source code |
| SPADE.writeGraph | Source code |
| cleanStr | Source code |
| cnvrt.coords | Source code |
| indexOf | Source code |
| markerPercents | Source code |
| percentCluster | Source code |
| subplot | Source code |
