SPADE.installPlugin: Install CytoSPADE Cytoscape plugin

Description Usage Arguments Details Value Author(s) Examples

Description

Install, CytoSPADE, the Cytoscape plugin for working with SPADE that is distributed with the SPADE R package. CytSPADE provides a GUI for setting-up SPADE analyses and interactively visualizing the results.

Usage

1
SPADE.installPlugin(cytoscape_path)

Arguments

cytoscape_path

Path to your Cytoscape install. For example, on OSX it is typically something like '/Applications/Cytoscape_v2.8.3'

Details

Copies the Cytoscape plugin file distributed with the SPADE R package to the Cytoscape plugin directory.

Value

Logical indicating success of the copy operation.

Author(s)

Michael Linderman

Examples

1
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# On OSX:
# SPADE.installPlugin("/Applications/Cytoscape_v2.8.3/")

nolanlab/spade documentation built on May 23, 2019, 9:32 p.m.