Files in nosarcasm/DGCA
Differential Gene Correlation Analysis

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
R/DGCA_package.R R/adjustMIPval.R R/adjustPVals.R R/bigEmpPVals.R R/dCor.R R/dCorAvg.R R/dCorClass.R R/dCorMats.R R/dcTopPairs.R R/ddMEGENA.R R/ddcorAll.R R/ddcorAllParallel.R R/ddcorAllParallelWorker.R R/ddcorClasses.R R/ddcorGO.R R/ddplot.R R/designMats.R R/filterGenes.R R/getCors.R R/getDCorPerm.R R/getDCors.R R/getQValue.R R/makeDesign.R R/matCorSig.R R/matCorr.R R/matNSamp.R R/moduleDC.R R/moduleGO.R R/pairwiseDCor.R R/permQValue.R R/plotCors.R R/plotGOOnegroup.R R/plotGOTwoGroups.R R/plotVals.R R/startCluster.R R/topDCGenes.R README.Rmd README.md
build/vignette.rds
cran-comments.md
data/.Rapp.history
data/ages_darmanis.rda
data/darmanis.rda
data/design_mat.rda
ddcorParallelExample.R examples/batchtools_minimal_package_local.R inst/config/batchConfig_Local.R inst/config/batchConfig_Zhang.R inst/config/ddcorClasses.R
inst/config/minerva_LSF.tmpl
inst/doc/.Rhistory
inst/doc/DGCA.Rmd
inst/doc/DGCA.html
inst/doc/DGCA_basic.R inst/doc/DGCA_basic.Rmd
inst/doc/DGCA_basic.html
inst/doc/DGCA_modules.Rmd inst/doc/DGCA_modules.pdf
man/.Rapp.history
man/DGCA.Rd man/adjustPVals.Rd man/ages_darmanis.Rd man/bigEmpPVals.Rd man/corMats-class.Rd man/dCorAvg.Rd man/dCorClass.Rd man/dCorMats.Rd man/dCorrs.Rd man/darmanis.Rd man/dcPair-class.Rd man/dcTopPairs.Rd man/ddMEGENA.Rd man/ddcorAll.Rd man/ddcorAllParallel.Rd man/ddcorAllParallelWorker.Rd man/ddcorFindSignificant.Rd man/ddcorGO.Rd man/ddplot.Rd man/design_mat.Rd man/extractModuleGO.Rd man/filterGenes.Rd man/findGOTermEnrichment.Rd man/getCors.Rd man/getDCorPerm.Rd man/getDCors.Rd man/getGroupsFromDesign.Rd man/getQValue.Rd man/makeDesign.Rd man/matCorSig.Rd man/matCorSig.fuzz.Rd man/matCorr.Rd man/matNSamp.Rd man/moduleDC.Rd man/moduleGO.Rd man/pairwiseDCor.Rd man/permQValue.Rd man/plotCors.Rd man/plotGOOneGroup.Rd man/plotGOTwoGroups.Rd man/plotModuleGO.Rd man/plotVals.Rd man/switchGenesToHGCN.Rd man/topDCGenes.Rd tests/testthat.R
tests/testthat/darmanis_design_matrix.rda
tests/testthat/darmanis_test.rda
tests/testthat/test-adjP.R tests/testthat/test-dCorAvg.R tests/testthat/test-dCorrs.R tests/testthat/test-ddcor-pipeline.R tests/testthat/test-ddmegena.R tests/testthat/test-filterGenes.R tests/testthat/test-getCors.R tests/testthat/test-matCors.R
vignettes/.Rhistory
vignettes/DGCA_basic.Rmd
vignettes/DGCA_basic.html
nosarcasm/DGCA documentation built on Oct. 18, 2018, 4:49 a.m.