Generic: Model for predicting PID based on k-mer statistics
In npcooley/SynExtend: Tools for Working With Synteny Objects
Generic R Documentation
Model for predicting PID based on k-mer statistics
Description
Though the function PairSummaries provides an argument allowing users to ask for alignments, given the time consuming nature of that process on large data, models are provided for predicting PIDs of pairs based on k-mer statistics without performing alignments.
Usage
data("Generic")
Format
The format is an object of class “glm”.
Details
A model for predicting the PID of a pair of sequences based on the k-mers that were used to link the pair.
Examples
data(Generic)
npcooley/SynExtend documentation built on Dec. 20, 2024, 4:03 p.m.
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| Generic | R Documentation |
Model for predicting PID based on k-mer statistics
Description
Though the function PairSummaries provides an argument allowing users to ask for alignments, given the time consuming nature of that process on large data, models are provided for predicting PIDs of pairs based on k-mer statistics without performing alignments.
Usage
data("Generic")Format
The format is an object of class “glm”.
Details
A model for predicting the PID of a pair of sequences based on the k-mers that were used to link the pair.
Examples
data(Generic)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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