Man pages for nspope/radish
Fast gradient-based optimization of resistance surfaces
| conductance_surface | Create a parameterized conductance surface |
| cov_from_biallelic | Covariance from allele counts |
| dist_from_biallelic | Distance from allele counts |
| dist_from_cov | Distance matrix from covariance matrix |
| fst_from_biallelic | Fst from allele counts |
| generalized_wishart | Generalized Wishart distance regression |
| HagerZhangControl | Control settings for Hager-Zhang line search |
| leastsquares | (Nonnegative) least squares |
| linear_conductance | Identity-link conductance model |
| loglinear_conductance | Log-link conductance model |
| mlpe | Maximum likelihood population effects |
| NewtonRaphsonControl | Controls for Newton-like optimizer |
| radish | Optimize a parameterized conductance surface |
| radish_algorithm | Likelihood of parameterized conductance surface |
| radish_conductance_model_factory | Conductance model factories |
| radish_distance | Resistance distances from a parameterized conductance surface |
| radish_grid | Evaluate likelihood of a parameterized conductance surface |
| radish_measurement_model | Measurement models |
