fst_from_biallelic: Fst from allele counts

In nspope/radish: Fast gradient-based optimization of resistance surfaces

Description

Calculates Fst using the estimator of Bhatia et al (2015) from counts of the derived allele across biallelic markers

Usage

fst_from_biallelic(Y, N)

Arguments

Y	A matrix containing allele counts, of dimension (number of demes) x (number of loci)
N	A matrix containing the number of sampled haplotypes, of dimension (number of demes) x (number of loci)

Value

A matrix containing pairwise Fst

References

Bhatia et al 2015 TODO

nspope/radish documentation built on July 12, 2020, 11:50 a.m.