check.dima: Create a list of data frames documenting errors in plot, LPI,...

In nstauffer/dima.tools: Reading, Manipulating, Analyzing, and Visualizing Data from Copies of the Database for Inventory, Monitoring, and Assessment (DIMA)

Description

Create a list of data frames documenting errors in plot, LPI, gap, species richness, soil stability, and soil pit forms.

Usage

check.dima(dima.tables = NULL, dima.filepath = NULL, dima.filename = NULL,
  all.species = NULL, expected.linecount = 3, write = TRUE)

Arguments

dima.tables	List of data frames. Optional only if instead providing values for dima.filepath and dima.filename. The result of importing one or more DIMA with read.dima(). Must contain the data frames tblSites, tblPlots, tblLines, tblLPIDetail, tblLPIHeader, tblGapDetail, tblGapHeader, tblSoilStabDetail, tblSoilStabHeader, tblSpecRichDetail, tblSpecRichHeader, tblSoilPits, and tblSoilPitHorizons. Defaults to NULL.
dima.filepath	Character string. Optional only if instead providing a list of data frames as dima.tables. If provided, must match the full filepath to the folder containing the DIMA or DIMAs to read in. Defaults to NULL.
dima.filename	Character string. Optional only if instead providing a list of data frames as dima.tables. If provided, must match the full filename or filenames of the DIMA or DIMAs to read in from the folder specified in dima.filepath. Defaults to NULL.
all.species	Data frame. The full list of species found in the USDA PLANTS database. Must contain the species symbol in the variable "Symbol". Defaults to the result of default.species().
expected.linecount	Numeric. The expected number of lines recorded on per plot. Defaults to 3.
write	Logical. If TRUE and dima.filepath is not NULL then the error data frames will be written as CSV files into that filepath. Defaults to TRUE.

nstauffer/dima.tools documentation built on May 20, 2019, 2:09 p.m.