createJunctionsTemplate: Creates a template of alternative splicing junctions

In nuno-agostinho/psichomics: Graphical Interface for Alternative Splicing Quantification, Analysis and Visualisation

Creates a template of alternative splicing junctions

Description

Creates a template of alternative splicing junctions

Usage

createJunctionsTemplate(
  nrow,
  program = character(0),
  event.type = character(0),
  chromosome = character(0),
  strand = character(0),
  id = character(0)
)

Arguments

nrow	Integer: row number
program	Character: program used to get the junctions
event.type	Character: event type
chromosome	Character: chromosome
strand	Character: positive-sense (+) or negative-sense (-) strand
id	Character: event identifiers

Value

A data frame with the junctions coordinate names pre-filled with NA

Examples

psichomics:::createJunctionsTemplate(nrow = 8)

nuno-agostinho/psichomics documentation built on Feb. 11, 2024, 11:16 p.m.