calculate_windowed_ld: Calculate average LD values in sliding windows
In nwvankuren/genomics-plotting: Utilities for plotting statistics from genome-wide analyses
Description
Usage
Arguments
Value
View source: R/binning_functions.R
Description
This function will take as input a tibble containing a PLINK LD file
loaded with load_plink_ld(), calculate mean LD values (based on the stat
column values), and return a new tibble.
Usage
1
calculate_windowed_ld(input, window, step)
Arguments
input
A tibble constructed with load_plink_ld
window
Size of window, in bp, to calculate mean LD in
step
Step size between windows
Value
A four-column tibble containing summary statistics
nwvankuren/genomics-plotting documentation built on April 14, 2021, 1:18 a.m.
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Description Usage Arguments Value
View source: R/binning_functions.R
Description
This function will take as input a tibble containing a PLINK LD file loaded with load_plink_ld(), calculate mean LD values (based on the stat column values), and return a new tibble.
Usage
1 | calculate_windowed_ld(input, window, step)
|
Arguments
input |
A tibble constructed with load_plink_ld |
window |
Size of window, in bp, to calculate mean LD in |
step |
Step size between windows |
Value
A four-column tibble containing summary statistics
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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