calculate_windowed_ld: Calculate average LD values in sliding windows
In nwvankuren/gwplotting: Utilities for plotting statistics from genome-wide analyses
View source: R/binning_functions.R
calculate_windowed_ld R Documentation
Calculate average LD values in sliding windows
Description
This function will take as input a tibble containing a PLINK LD file
loaded with load_plink_ld(), calculate mean LD values (based on the stat
column values), and return a new tibble.
Usage
calculate_windowed_ld(input, window, step)
Arguments
input
A tibble constructed with load_plink_ld
window
Size of window, in bp, to calculate mean LD in
step
Step size between windows
Value
A four-column tibble containing summary statistics
nwvankuren/gwplotting documentation built on July 5, 2024, 4:24 p.m.
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View source: R/binning_functions.R
| calculate_windowed_ld | R Documentation |
Calculate average LD values in sliding windows
Description
This function will take as input a tibble containing a PLINK LD file loaded with load_plink_ld(), calculate mean LD values (based on the stat column values), and return a new tibble.
Usage
calculate_windowed_ld(input, window, step)
Arguments
input |
A tibble constructed with load_plink_ld |
window |
Size of window, in bp, to calculate mean LD in |
step |
Step size between windows |
Value
A four-column tibble containing summary statistics
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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