indexplot: Create visual representation of one gene expression according...
In obricard/cleanhop: Index hopping correction for scRNAseq
Description
Usage
Arguments
Value
Examples
Description
Create visual representation of one gene expression according to indexes combinaisons.
Usage
1
indexplot(sce, goi)
Arguments
sce
A SingleCellExperiement object.
goi
Gene of interest
Value
ggplot
Examples
1
2
3
4
sce <- SingleCellExperiment(assays = list(counts = as.matrix(cleanhop_counts)),
colData = cleanhop_annotations)
indexplot(sce, "B2M")
indexplot(sce, "CCR8")
obricard/cleanhop documentation built on July 26, 2019, 8:22 a.m.
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Description Usage Arguments Value Examples
Description
Create visual representation of one gene expression according to indexes combinaisons.
Usage
1 | indexplot(sce, goi)
|
Arguments
sce |
A SingleCellExperiement object. |
goi |
Gene of interest |
Value
ggplot
Examples
1 2 3 4 | sce <- SingleCellExperiment(assays = list(counts = as.matrix(cleanhop_counts)),
colData = cleanhop_annotations)
indexplot(sce, "B2M")
indexplot(sce, "CCR8")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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