interact_multi: interact_multi
In octaviamd/interactmapper: An Interactive Plotting Tool for Dimension Reduction

Description Usage Arguments Value Examples

View source: R/interact_multi.R

Generates an interactive dimension reduction plot that is color-coordinated with a main feature of interest related to your dataset, and displays additional secondary information upon mouse hover over points.

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interact_multi(count_data, main_info_data, sec_info_data,
  dim_red_meth = c("UMAP", "PCA"), your_palette, main_info_name,
  sec_info_name)

`count_data`	dataframe of input data
`main_info_data`	data for main feature of interest for samples of dataset
`sec_info_data`	data for secondary feature of interest for samples of dataset
`dim_red_meth`	dimension reduction method: "pca" or "umap" are the options available now
`your_palette`	the palette of your choice (please see `colour_values` documentation to see options)
`main_info_name`	title for main feature of interest
`sec_info_name`	title (or vector of titles in the case of multiple) for the secondary features of interest

interactive dimension reduction plot that is color-coordinated with a main feature of interest related to your dataset, and displays additional secondary information upon mouse hover over points.

## Not run: 
if(interactive()){
 interact_multi(iris[,1:4], iris$Sepal.Length, iris$Species, "UMAP", "viridis", "Sepal Length", "Species")
 interact_multi(iris[,1:4], iris$Species, iris[,1:2], "UMAP", "viridis", "Species", c("Sepal Length", "Sepal Width"))
 }

## End(Not run)