bioGender: Detects gender of microarray samples
In oganm/ogbox: Stuff and things
bioGender R Documentation
Detects gender of microarray samples
Description
Detects gender of microarray samples based on expression of sex specific genes as described by Toker et al. 2016 (PMC5034794).
Usage
bioGender(
x,
geneColName = "Gene.Symbol",
probeColName = "Probe",
maleGenes = c("RPS4Y1", "KDM5D"),
femaleGenes = "XIST"
)
Arguments
x
Expression data frame with gene symbol and probename information in the first columns
geneColName
column name for gene symbols
probeColName
column name for probeset names
maleGenes
names of male genes
femaleGenes
names of female genes
oganm/ogbox documentation built on Feb. 18, 2024, 12:37 a.m.
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| bioGender | R Documentation |
Detects gender of microarray samples
Description
Detects gender of microarray samples based on expression of sex specific genes as described by Toker et al. 2016 (PMC5034794).
Usage
bioGender(
x,
geneColName = "Gene.Symbol",
probeColName = "Probe",
maleGenes = c("RPS4Y1", "KDM5D"),
femaleGenes = "XIST"
)
Arguments
x |
Expression data frame with gene symbol and probename information in the first columns |
geneColName |
column name for gene symbols |
probeColName |
column name for probeset names |
maleGenes |
names of male genes |
femaleGenes |
names of female genes |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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