xcmsrawAuc: Calculate area under the curve from 'xcmsRaw' object

Description Usage Arguments

View source: R/xcmsrawAuc.R

Description

Calculate area under the curve from xcmsRaw object

Usage

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xcmsrawAuc(scan, mzrange = NULL, mz = NULL, mzabs = NULL, xraw,
  type = "profile", msLevel = 1)

Arguments

scan

An Numeric vector. Scan index within the indicated MS level.. Note that this scan index is NOT the actual scan number (include both MS1 and MS2). This corresoinds to the index of the actual scan number in [email protected] slot.

mz

Center m/z values

mzabs

Width to integrate

xraw

An object of class xcmsRaw class

type

"profile" or "centroid". Default, "profile".

msLevel

MS level (default 1).


ohgane/ShotgunLipidomicsR documentation built on May 23, 2017, 7:10 p.m.