xcmsrawAuc: Calculate area under the curve from 'xcmsRaw' object
In ohgane/ShotgunLipidomicsR: Utility Functions for Analysis/Visualization of ShotgunLipidomics Data.
Description
Calculate area under the curve from xcmsRaw object
Usage
1
2
Arguments
scan
An Numeric vector. Scan index within the indicated MS level..
Note that this scan index is NOT the actual scan number (include both MS1 and MS2).
This corresoinds to the index of the actual scan number in
xcmsRaw@msnAcquisitionNum slot.
mz
Center m/z values
mzabs
Width to integrate
xraw
An object of class xcmsRaw class
type
"profile" or "centroid". Default, "profile".
msLevel
MS level (default 1).
ohgane/ShotgunLipidomicsR documentation built on May 24, 2019, 11:55 a.m.
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Description
Calculate area under the curve from xcmsRaw object
Usage
1 2 |
Arguments
scan |
An Numeric vector. Scan index within the indicated MS level..
Note that this scan index is NOT the actual scan number (include both MS1 and MS2).
This corresoinds to the index of the actual scan number in
|
mz |
Center m/z values |
mzabs |
Width to integrate |
xraw |
An object of class |
type |
"profile" or "centroid". Default, "profile". |
msLevel |
MS level (default 1). |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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