plotPIS: Plot PIS data set (comparison of two spectra)

In ohgane/ShotgunLipidomicsR: Utility Functions for Analysis/Visualization of ShotgunLipidomics Data.

Description

Plot PIS (precursor ion scanning) data

Usage

plotPIS(pisdata, col = c("blue", "red"), lty = c(1, 1), mzrange = NULL,
  fill.col = adjustcolor(c("skyblue", "salmon"), alpha.f = 0.5), ...)

Arguments

pisdata	A data frame constructed from xcmsRaw object via constructPIS() function.
col	A vector of colors for lines. Default, blue and red.
lty	Types of lines. Same as base graphics.
mzrange	The m/z range to plot. A numeric vector of the length 2.
fill.col	A vector of colors for area under the curve. Default, transparent colors.

ohgane/ShotgunLipidomicsR documentation built on May 24, 2019, 11:55 a.m.