get_cor_scores_genes: Get the list of genes used to define correlated scores of...

In olapuentesantana/easierData: easier internal data and exemplary dataset from IMvigor210CoreBiologies package

Description

Obtain the list of genes used to define each of the correlated scores of immune response. These scores were found to be highly correlated across all 18 cancer types.

Usage

get_cor_scores_genes()

Value

A character vector with gene names.

References

Óscar Lapuente-Santana, Maisa van Genderen, Peter A. J. Hilbers, Francesca Finotello, and Federica Eduati. 2021. Interpretable Systems Biomarkers Predict Response to Immune-Checkpoint Inhibitors. Patterns, 100293. https://doi.org/10.1016/j.patter.2021.100293.

Mariathasan, S., Turley, S., Nickles, D. et al. TGFB attenuates tumour response to PD-L1 blockade by contributing to exclusion of T cells. Nature 554, 544–548 (2018). https://doi.org/10.1038/nature25501.

Examples

if (interactive()) {
    cor_scores_genes <- get_cor_scores_genes()
}

olapuentesantana/easierData documentation built on Dec. 22, 2021, 4:19 a.m.