library(devtools)
library(optparse)
install_github('ollyburren/cogs')
option_list = list(
make_option(c("-p", "--pm"), type="character", default=NULL,
help="Input peakMatrix file", metavar="character"),
make_option(c("-b", "--ban"), type="character", default=NULL,
help="Input bait design file", metavar="character"),
make_option(c("-o", "--out"), type="character", default=NULL,
help="Output file", metavar="character"),
)
opt_parser = OptionParser(option_list=option_list);
args = parse_args(opt_parser)
if(is.null(args$pm) | is.null(args$ban) | is.null(args$out){
print_help(opt_parser)
stop("Arguments are missing")
}
annotate_pm(args$ban,args$pm,$args$out)
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.