attach_annotation: add annotation to screen object
In olobiolo/siscreenr: Analyze Genome-Wide siRNA Screening Campaigns

Description Usage Arguments Details Value Mismatching annotation

Merge library annotation with screen object.

1	attach_annotation(scr, ann)

`scr`	a `data.frame` containing the screen object
`ann`	path to library annotation file; if missing, defaults to internally stored annotation

The library annotation is merged with the screen object, dropping all plates not present in the screen. Missing gene symbols are substituted with their respective well types.

A data.table.

If the built-in annotation cannot be merged with the screen object, an error will be thrown and the annotation will be assigned in the Global Environment. It can then be modified and saved in a different file.

olobiolo/siscreenr documentation built on Nov. 26, 2021, 3:08 p.m.