browse: Browse: Retrieves information from the PCOSKB database

In omtarful/pcoskbR:

Browse: Retrieves information from the PCOSKB database

Description

This function scrapes data from PCOSKB. Given a set of filters and corresponding values, it retrieves information about genes, miRNAs, SNPs, diseases, pathways, and ontology associated with PCOS.

Usage

browse(page = c("Genes", "miRNA", "Diseases", "miRNA Diseases", "SNPs", "Pathways", "Ontologies"),
 filter = NULL,
 search_qry = "")

Arguments

page	Page from which data is retrieved. A possible list of pages can be retreived using the listPage function.
filter	Filter (one) that should be used in the query. A possible list of pages can be retieved using the listFilters function.
search_qry	Searches a keyword in the query.

Value

A data.frame. Size and attributes depend on query.

Author(s)

Omar Hassoun

Examples

 browse(page = "Genes", filter = "Manually curated", search_qry = "Fem")

omtarful/pcoskbR documentation built on March 20, 2022, 8:22 a.m.