Man pages for ong8181/macam
A collection of miscellaneous R functions for ecology
| AllOrients | AllOrients |
| assign_ps_barcol | Assign colors to phyloseq::plot_bar object |
| asv_sheet | Demo ASV table data used for phyloseq object |
| compute_mvd | Computing multiview distance |
| coverage_info | Calculate coverage information of a phyloseq object |
| coverage_info2 | Calculate coverage information of a phyloseq object |
| data_4sp | Four fish species time series from Ushio et al. (2018) |
| extended_lnlp | Perform regularized S-map using a generalized function |
| label_10_to_power | Power label function for ggplot2 |
| macam-package | macam: A collection of miscellaneous R functions for ecology |
| make_block_mvd | Generate block for MDR S-map |
| outdir_create | Create output directory using the currently-running file name |
| plot_rarefy | Visualize rarefaction curve |
| plot_rarefy2 | Visualize rarefaction curve |
| PrimerHits | PrimerHits |
| rarefy_even_coverage | Perform coverage-based rarefaction for a phyloseq object |
| rarefy_even_coverage2 | Perform coverage-based rarefaction for a phyloseq object... |
| sample_sheet | Demo sample data used for phyloseq object |
| save_session_info | Save session information using an output directory name |
| save_workspace | Save workspace using an output directory name |
| singleton_estimator | singleton_estimator is a function of obtaining the estimator... |
| s_map_mdr | A function for MDR S-map |
| s_map_mdr_all | A all-in-one wrapper function for MDR S-map |
| s_map_rgl | Perform regularized S-map |
| taxa_name_bundle | Bundle taxa names in a phyloseq object |
| tax_sheet | Demo taxa table data used for phyloseq object |
| twin_surrogate_cpp | Generate twin surrogate time series |
| uic_across | Perform UIC across data.frame |
