Description Usage Arguments Value See Also Examples
View source: R/qualimap-plots.R
This function plots the junction stats for samples. If
info regarding the group
each sample
belongs to is also
available, then the generated plot will take that into account to colour /
facet accordingly.
1 | plot_junction_analysis(..., interactive = TRUE, geom = "bar")
|
interactive |
logical, default is |
geom |
Only possible value is |
... |
The set of |
The plot object
qualimap
plot_read_alignment
plot_bias_profile
plot_coverage_profile
plot_genomic_origin
1 2 3 4 5 6 7 8 | path = system.file("tests/qualimap-sample", package="ggqualimap")
obj = qualimap(sample_info = file.path(path, "annotation.txt"))
# interactive
plot_junction_analysis(sample = obj)
# non-interactive
plot_junction_analysis(sample = obj, interactive=FALSE)
|
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