plot_selected_etiology: Plot grouped (two groups) posterior and cascade distributions...

In oslerinhealth-releases/baker: Bayesian Analysis Kit for Etiology Research

Description

Plot grouped (two groups) posterior and cascade distributions (next top-three) within each group

Usage

plot_selected_etiology(selected, DIR_NPLCM, ksFrac = 1, levellabel = 5)

Arguments

selected	a vector of character strings of length 3: the names of etiologies to visualize.
DIR_NPLCM	The file path to the result folder
ksFrac	A number between 0 and 1, which is the fraction of samples used to calculate kernel stats::density
levellabel	The contour line to be drawn in the final plot. Default is 5, which represents the contour of the 95 percent support region.

Details

By default the function automatically orders pathogens by posterior means (increase clockwise)

Value

A figure with group etiology.

See Also

Other visualization functions: plot_BrS_panel, plot_SS_panel, plot_check_common_pattern, plot_check_pairwise_SLORD, plot_etiology_regression, plot_etiology_side_by_side, plot_etiology_strat, plot_group_etiology, plot_panels, plot_pie_panel

oslerinhealth-releases/baker documentation built on Nov. 4, 2019, 11:11 p.m.