is_kallisto_subset: Is Kallisto Object Subsetted?

In pachterlab/sleuth: Tools for investigating RNA-Seq

Is Kallisto Object Subsetted?

Description

This function returns a boolean for whether the kallisto object has been subsetted or if it contains the original set of target_ids analyzed by kallisto. If a sleuth object is given, then a vector of booleans for each kallisto object is returned.

Usage

is_kallisto_subset(obj)

Arguments

obj	a sleuth or kallisto object

Value

a boolean vector with TRUE if the kallisto object has been subsetted (i.e. not all originally analyzed target_ids are represented), or FALSE if the kallisto object contains the full original set of target_ids. For a sleuth object, a boolean vector for all of the contained kallisto objects is returned.

pachterlab/sleuth documentation built on Nov. 17, 2022, 4:51 p.m.